基于CRISPR–Cas9和piggyBac转座酶的单质粒基因组编辑方法

    A single plasmid genome editing method based on CRISPR-Cas9 and piggyBac transposase

    • 摘要:
      目的: 建立一种由具有切除能力但整合能力缺陷的piggyBac转座酶(PB)和Cas9组成的单质粒基因组编辑方法,即同时表达Cas9–PB融合蛋白和携带插入基因。
      方法: 对质粒pU6–(BbsI)_CBh–Cas9–T2A–mCherry进行限制酶消化,插入编码具有切除能力但整合能力缺陷的piggyBac转座酶序列,以及3'PB 终端重复序列(3'ITR)和5'PB终端重复序列(5'ITR),并在U6启动子和sgRNA支架之间插入sgRNAs,获得最终质粒;转染人胚胎肾293细胞,筛选单克隆细胞,进行PCR鉴定和Sanger测序分析。
      结果: 构建了一种单质粒系统,包含具有切除能力但整合能力缺陷的piggyBac转座酶与Cas9的融合蛋白,以及 3'PB(3'ITR)–CMV 启动子–5'PB(5'ITR)piggyBac转座子;在 AAVS1基因中实现了靶向整合,且未检测到脱靶插入区域。
      结论: 本研究建立了一种基于CRISPR–Cas9和piggyBac转座酶的单质粒基因组编辑方法,能够进行有效且准确的基因整合,几乎不会出现脱靶和随机插入现象,有望成为未来基因治疗应用中的潜在候选工具。

       

      Abstract:
      Objective To establish a single-plasmid genome editing method composed of piggyBac transposase (PB) with excision ability but deficient integration ability and Cas9, that is, to simultaneously express the Cas9-PB fusion protein and carry the inserted gene.
      Methods Restriction enzyme digestion was performed on the plasmid pU6-(BbsI)_CBh-Cas9-T2A-mCherry. The sequence encoding piggyBac transposase with excision ability but integration ability defect, 3'PB terminal repeat sequence (3'ITR) and 5'PB terminal repeat sequence (5'ITR) were inserted, and the sgRNAs were inserted into between the U6 promoter and sgRNA scaffold to obtain the final plasmid. Human embryonic kidney 293 cells were transfected to screen monoclonal cells, the PCR was used to identify and the Sanger sequencing was used to analyzed.
      Results A single plasmid system was constructed, including a fusion protein of piggyBac transposase with excision ability but deficient integration ability, Cas9 and 3'PB (3'ITR) -CMV promoter -5'PB (5'ITR) piggyBac transposon; Targeted integration was achieved in the AAVS1 gene, and no off-target insertion regions was detected.
      Conclusions This study establishes a single plasmid genome editing method based on CRISPR-Cas9 and piggyBac transposase, which can perform effective and accurate gene integration with almost no off-target or random insertion. It is expected to become a potential candidate tool for future gene therapy applications.

       

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