5号染色体开放阅读框34基因在肝细胞癌中表达及其与临床病理特征、预后的相关性

    Study on the gene expression of C5orf34 in hepatocellular carcinoma and its correlation with clinicopathological features and prognosis

    • 摘要:
      目的: 探讨5号染色体开放阅读框34基因(chromosome 5 open reading frame 34,C5orf34)在肝细胞癌(hepatocellular carcinoma,HCC)中的表达情况及其与HCC的临床病理特征、预后的相关性。
      方法: 利用TIMER、TCGA和THE HUMAN PROTEIN ATLAS数据库分析C5orf34在HCC组织中的表达水平。利用 Kaplan-Meier Plotter数据库在线分析HCC病人生存期与C5orf34表达的关系。通过基因富集分析(Gene set enrichment analysis,GSEA)预测C5orf34高风险组中富集的生物学功能和通路。利用TIMER数据分析C5orf34与免疫浸润细胞的关系。
      结果: C5orf34在HCC组织中的mRNA和蛋白表达水平均显著高于正常肝组织,且C5orf34表达水平与年龄、病理分级及肿瘤分级显著相关。生存分析表明C5orf34高表达的HCC病人其总生存期(OS)、无进展生存期(PFS)、无复发生存期(RFS)显著缩短。GSEA分析表明C5orf34高表达组主要富集的通路包括细胞周期、DNA复制、错配修复和同源重组等。TIMER数据库分析显示C5orf34 在HCC免疫微环境中与肿瘤纯度、B细胞、CD8+ T细胞、CD4+ T细胞、巨噬细胞、中性粒细胞和树突状细胞的表达水平呈正相关。
      结论: C5orf34在HCC中高表达且与HCC的发生发展和预后不良密切相关,可作为评估HCC预后的生物学标志物。

       

      Abstract:
      Objective To explore the expression levels of the chromosome 5 open reading frame 34 (C5orf34) gene in hepatocellular carcinoma (HCC), and its correlation with clinicopathological features and prognosis.
      Methods The expression of C5orf34 in HCC tissues was analyzed using the TIMER, TCGA and THE HUMAN PROTEIN ATLAS databases. The relationship between the survival period of HCC patients and expression of C5orf34 was analyzed online using the Kaplan-Meier Plotter database. The enriched biological functions and pathways of C5orf34 in the high-risk group were predicted by Gene set enrichment analysis (GSEA). The relationship between C5orf34 and immune-infiltrating cells was analyzed using TIMER data.
      Results The mRNA and protein expression levels of C5orf34 in HCC tissues were significantly higher than those in normal liver tissues, and the expression level of C5orf34 was significantly correlated with the age, pathological grade and tumor grade. The results of survival analysis indicated that the overall survival (OS), progression-free survival (PFS) and recurrence-free survival (RFS) in HCC patients with high expression of C5orf34 were significantly shortened. The results of GSEA analysis indicated that the main enriched pathways in the C5orf34 high-expression group included cell cycle, DNA replication, mismatch repair and homologous recombination, etc. The TIMER database analysis showed that the C5orf34 was positively correlated with the expression levels of tumor purity, B cells, CD8+ T cells, CD4+ T cells, macrophages, neutrophils and dendritic cells in the HCC immune microenvironment.
      Conclusions The C5orf34 is highly expressed in HCC, and closely related to the occurrence, development and poor prognosis of HCC, and can be used as a biomarker for evaluating the prognosis of HCC.

       

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